Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887250.1_cds_XP_016441584.1_36928
CDS Infomation

[gene=LOC107767176] [db_xref=GeneID:107767176] [protein=bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X2] [protein_id=XP_016441584.1] [location=complement(join(125479..125522,125966..126128,126219..126505,126630..126738,127285..127348,127479..127819,128054..128300,129107..129204))] [gbkey=CDS]
Sequence

ATGAGTTTGAAGAGGATGATGACCACATCCACAAGCAGTTGGAAGTCCTTCGGTGGGCTA
AAGAATTGGGAGCTGATTATATTGAGTTGGACCTCAAGAGTGTTCCTGAACTTCTATAAT
CTTGTTCAGATAGCTAGTGACTTCACGAAAAAAGAAAAGTCGAGGTGGAGTAGTGGTTGT
AAAGTAATTGCATCATGCTTTGTGGACAATGTGACCTCAAAAGAAGACCTCAGCCAAGTT
GTTGCACACATGCAATCTACTGGGGCTGATATCCTCAAAATTGTTACAAATGCAAATGAC
ATTACAGAACTAGAGAAAATGTTTCACTTGCTTTCACATTGCCAGGTACCACTTATTGCA
TACTCTCTTGGGGAAAGAGGTCTCATAAGTCAGTTGTTGGGCCCGAAATTTGGTAGTGTC
CTAGTATATGGATCTCTTGATTGTAATGCTGTACCTGGTCTGCCTACTCTCGGCAGCCTT
AGACAAGCCTATGGAGTTGATTTTATGGATACTGATACTAAAGTGTTTGGGCTCATCTCT
AAACCAGTGGGTCATAGTAAAGGACCTATTTTGCATAATCCTACATTTAGACATGTGGGG
TACAATGGAATTTATGTTCCAATGTTTGTCGATGATCTTAAGGAGTTCTTCAGGGTCTAC
TCAAGTCCTGACTTTGCTGGTTTCAGTGTTGGGATCCCTTACAAGGAAGCAGTGGTGAGT
TTTTGTGATGAAGTCGATCCTCTGGCTAAGTCTATAGGGGCTGTAAATACTATCATACAG
AGGCCTTGCGACGGAAAGCTAATTGGTTATAACACAGATTGTGAGGCTTCTATAACAGCC
ATTGAGGATGCTTTGAAAGTAAATGGAGCAGCTTTTCTTCCTTCTCCACTCGCGGGTAAA
CTGTTTGTGCTGGTGGGTGCTGGAGGTGCAGGAAGAGCTTTGGCATTCGGAGCCAAAAGC
AGGAGAGCTCAAATTATGATTTTTGACATTGATTTTGATAGAGCAAAGGCTCTTGCTGCT
GCAGTTTCTGGTGAAGCTCTGCCATTTGAGAATTTAGCTTCTTTTCAGCCTGAGAAAGGT
GCAATCCTTGCCAATGCAACACCTATCGGAATGCATCCAAATAAAGATAGGATACCTGTT
TCTGAGGCAACCTTGAAGGATTATCTAGTGGTGTTTGATGCTGTTTATACACCTAGAAAG
ACTACTCTGCTGAAAGACGCTGAGGCTGCTGGAGCAATCACTGTCAGTGGAGTTGAAATG
TTTCTTAGACAGGCCATTGGCCAATTCCACCTTTTCACGGGAAGTAAAGCACCCGAAGAA
TTCATGCGCGAGATCGTTATGGCAAAATTCTAA

Peptide Sequence

PEP ID

XP_016441584.1
PEP Infomation

PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MSLKRMMTTSTSSWKSFGGLKNWELIILSWTSRVFLNFYNLVQIASDFTKKEKSRWSSGC
KVIASCFVDNVTSKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLSHCQVPLIA
YSLGERGLISQLLGPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTDTKVFGLIS
KPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGIPYKEAVVS
FCDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGAAFLPSPLAGK
LFVLVGAGGAGRALAFGAKSRRAQIMIFDIDFDRAKALAAAVSGEALPFENLASFQPEKG
AILANATPIGMHPNKDRIPVSEATLKDYLVVFDAVYTPRKTTLLKDAEAAGAITVSGVEM
FLRQAIGQFHLFTGSKAPEEFMREIVMAKF

Transcript Sequence

Gene sequence data has not been registered.